Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm10936-201ENSMUST00000105264 252 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm14755-201ENSMUST00000118037 384 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm14480-201ENSMUST00000118521 433 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb3O54879 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm25962-201ENSMUST00000157173 168 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm6098-201ENSMUST00000180234 330 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm29354-201ENSMUST00000187613 696 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm7631-201ENSMUST00000196935 1100 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm45196-201ENSMUST00000206751 825 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm5815-201ENSMUST00000050706 1185 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm10015-201ENSMUST00000072570 465 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Mir24-2-201ENSMUST00000083607 107 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Gm38195-201ENSMUST00000194247 1499 ntBASIC5.38□□□□□ -1.55
Hmgb3O54879 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb3O54879 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb3O54879 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm14727-201ENSMUST00000118526 525 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm15129-201ENSMUST00000119673 279 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm15786-201ENSMUST00000121079 450 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm11258-201ENSMUST00000121086 1218 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm14721-201ENSMUST00000121381 525 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm42883-201ENSMUST00000202594 222 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb3O54879 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Gm9801-201ENSMUST00000054860 408 ntBASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hmgb3O54879 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms