Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm6061-201ENSMUST00000175860 492 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 AC117769.2-201ENSMUST00000224612 469 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 AC158988.1-201ENSMUST00000226731 2624 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 AC138284.1-201ENSMUST00000214258 3236 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm24888-201ENSMUST00000104387 130 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm14712-201ENSMUST00000120195 772 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm9428-201ENSMUST00000127214 769 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm29197-201ENSMUST00000185922 702 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm9710-201ENSMUST00000198053 499 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 CT025598.1-201ENSMUST00000225140 427 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Olfr467-201ENSMUST00000084756 927 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm37951-201ENSMUST00000192963 3032 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm37086-201ENSMUST00000193082 3452 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm23674-201ENSMUST00000157473 131 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm20691-201ENSMUST00000176889 333 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm23450-201ENSMUST00000178285 91 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm43850-201ENSMUST00000202021 578 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc180J3QNE4 Gm6820-201ENSMUST00000188803 2173 ntBASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc180J3QNE4 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm15967-201ENSMUST00000120027 1116 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm23891-201ENSMUST00000158114 138 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm22530-201ENSMUST00000158820 118 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm15257-201ENSMUST00000177680 883 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm15252-201ENSMUST00000177750 883 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm15256-201ENSMUST00000177793 883 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm15260-201ENSMUST00000179402 883 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm43160-201ENSMUST00000196453 421 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 AC164426.1-201ENSMUST00000225745 929 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 CT009515.3-201ENSMUST00000226509 671 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm18716-201ENSMUST00000204507 1603 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 AC121286.2-201ENSMUST00000218069 2470 ntBASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc180J3QNE4 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm23343-201ENSMUST00000158964 143 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm37187-201ENSMUST00000193425 341 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm3321-201ENSMUST00000200603 1129 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm44770-201ENSMUST00000205395 1264 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 AC135083.2-201ENSMUST00000228599 1456 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm36933-201ENSMUST00000194945 3071 ntBASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc180J3QNE4 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms