Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm45626-201ENSMUST00000210093 361 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm45733-201ENSMUST00000212988 437 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm46231-201ENSMUST00000220152 314 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm24621-201ENSMUST00000082679 140 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Srp54bE9PXC0 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.78□□□□□ -1.32
Srp54bE9PXC0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
Srp54bE9PXC0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Srp54bE9PXC0 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Srp54bE9PXC0 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm15216-201ENSMUST00000118058 277 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm15311-201ENSMUST00000119682 282 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm15305-201ENSMUST00000120354 288 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm12369-201ENSMUST00000121343 942 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm11609-201ENSMUST00000121926 793 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm17217-201ENSMUST00000166613 469 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm18808-201ENSMUST00000173316 462 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm23810-201ENSMUST00000175150 74 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm26570-201ENSMUST00000180672 342 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm28846-201ENSMUST00000189161 368 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm35323-201ENSMUST00000191836 499 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm43459-201ENSMUST00000202093 331 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.77□□□□□ -1.33
Srp54bE9PXC0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Srp54bE9PXC0 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm22267-201ENSMUST00000104008 131 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm13176-201ENSMUST00000117910 477 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm12242-201ENSMUST00000118824 738 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm12451-201ENSMUST00000121636 633 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Mir1900-201ENSMUST00000122714 78 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Mir6989-201ENSMUST00000184812 65 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm29663-201ENSMUST00000186962 853 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm29464-201ENSMUST00000187692 513 ntBASIC6.76□□□□□ -1.33
Srp54bE9PXC0 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms