Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm24286-201ENSMUST00000157632 128 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm24687-201ENSMUST00000157758 241 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm17895-201ENSMUST00000194028 874 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm3678-201ENSMUST00000218888 492 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Mir106b-201ENSMUST00000083580 82 ntBASIC5.65□□□□□ -1.5
Usf3B2RUQ2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Usf3B2RUQ2 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm23485-201ENSMUST00000104181 155 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm5601-201ENSMUST00000118909 972 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm22256-201ENSMUST00000102291 107 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm2178-201ENSMUST00000104927 357 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm25395-201ENSMUST00000157343 272 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm26211-201ENSMUST00000158578 129 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usf3B2RUQ2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm43339-201ENSMUST00000200032 1606 ntBASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm9506-201ENSMUST00000118516 320 ntBASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm5166-201ENSMUST00000121332 573 ntBASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC5.63□□□□□ -1.51
Usf3B2RUQ2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms