Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC113031.6-202ENSMUST00000228468 1145 ntBASIC5.68□□□□□ -1.5
Col6a4A2AX52 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a4A2AX52 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a4A2AX52 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a4A2AX52 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.68□□□□□ -1.5
Col6a4A2AX52 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Col6a4A2AX52 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm24790-201ENSMUST00000104285 132 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm11848-201ENSMUST00000121207 973 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm15959-201ENSMUST00000121724 368 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm14380-201ENSMUST00000122298 431 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm3076-201ENSMUST00000161613 451 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm19840-201ENSMUST00000169624 882 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm27601-201ENSMUST00000184794 127 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm29470-201ENSMUST00000188007 696 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm7891-201ENSMUST00000190284 843 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm5717-201ENSMUST00000198243 1062 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 AC159193.3-201ENSMUST00000221902 2622 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col6a4A2AX52 AC154461.6-201ENSMUST00000224815 2630 ntBASIC5.67□□□□□ -1.5
Col6a4A2AX52 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm5401-201ENSMUST00000122444 365 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm37187-201ENSMUST00000193425 341 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC122881.1-201ENSMUST00000225757 2695 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm37077-201ENSMUST00000195723 3691 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC158986.1-201ENSMUST00000228391 3455 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm15763-201ENSMUST00000120136 403 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Mir6361-201ENSMUST00000185079 101 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a4A2AX52 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.66□□□□□ -1.5
Col6a4A2AX52 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Col6a4A2AX52 Gm23426-201ENSMUST00000122483 318 ntBASIC5.65□□□□□ -1.5
Col6a4A2AX52 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms