Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm22111-201ENSMUST00000178010 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm24923-201ENSMUST00000178201 88 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm23687-201ENSMUST00000178664 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm24566-201ENSMUST00000179286 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm23305-201ENSMUST00000179342 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm26389-201ENSMUST00000179819 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm22130-201ENSMUST00000179979 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm22393-201ENSMUST00000180153 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm25085-201ENSMUST00000180298 79 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Mir6409-201ENSMUST00000184957 92 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm8209-201ENSMUST00000206386 553 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 AC156803.1-201ENSMUST00000224407 820 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 AC154371.1-201ENSMUST00000226600 412 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm20900-201ENSMUST00000078729 472 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm24613-201ENSMUST00000083266 130 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm24284-201ENSMUST00000104240 142 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm9432-201ENSMUST00000117810 759 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm11810-201ENSMUST00000118311 333 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm12090-201ENSMUST00000118692 758 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm12044-201ENSMUST00000120335 213 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm10157-201ENSMUST00000139408 343 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm16134-201ENSMUST00000161714 336 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm17047-201ENSMUST00000167709 430 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm45446-201ENSMUST00000209348 216 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm18228-201ENSMUST00000217297 1091 ntBASIC9.11□□□□□ -0.95
Ube3bQ9ES34 Gm18631-201ENSMUST00000223125 1043 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms