Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm23018-201ENSMUST00000177928 109 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm18848-201ENSMUST00000182069 792 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm28958-201ENSMUST00000185864 703 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm37493-201ENSMUST00000193167 433 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm42883-201ENSMUST00000202594 222 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm2221-201ENSMUST00000209342 418 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm9604-201ENSMUST00000211175 433 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm22774-201ENSMUST00000102084 109 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm13469-201ENSMUST00000118231 350 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm13221-201ENSMUST00000121712 430 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm26183-201ENSMUST00000157685 139 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm29759-201ENSMUST00000205860 327 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm45196-201ENSMUST00000206751 825 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Mir455-201ENSMUST00000093594 82 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 AU020206-202ENSMUST00000206358 3009 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lima1Q9ERG0 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.54□□□□□ -1.36
Lima1Q9ERG0 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm25631-201ENSMUST00000104390 130 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm26023-201ENSMUST00000122722 313 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 BC064078-201ENSMUST00000122939 570 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm17022-201ENSMUST00000166415 922 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm26959-201ENSMUST00000182376 978 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm28580-201ENSMUST00000186767 88 ntBASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.53□□□□□ -1.36
Lima1Q9ERG0 Gm7412-201ENSMUST00000191692 605 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms