Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm30517-201ENSMUST00000197350 772 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm9710-201ENSMUST00000198053 499 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm44566-201ENSMUST00000207638 304 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm17950-201ENSMUST00000214617 646 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC132446.1-201ENSMUST00000222655 226 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm5374-202ENSMUST00000222910 314 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm15500-201ENSMUST00000071523 894 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm14727-201ENSMUST00000118526 525 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm14721-201ENSMUST00000121381 525 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm16284-201ENSMUST00000140995 400 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm37191-201ENSMUST00000193346 388 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm24826-202ENSMUST00000197298 216 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm44896-201ENSMUST00000206190 772 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm9267-201ENSMUST00000222831 404 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.59□□□□□ -1.19
Smc1aQ9CU62 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.59□□□□□ -1.2
Smc1aQ9CU62 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Smc1aQ9CU62 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Smc1aQ9CU62 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm13940-201ENSMUST00000121023 301 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm11257-201ENSMUST00000121313 315 ntBASIC7.58□□□□□ -1.2
Smc1aQ9CU62 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms