Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm37295-201ENSMUST00000192186 109 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm37187-201ENSMUST00000193425 341 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm37901-201ENSMUST00000195107 514 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC163621.2-201ENSMUST00000222229 682 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm18955-201ENSMUST00000223173 649 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 AC125523.1-201ENSMUST00000228018 934 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC8.34□□□□□ -1.08
Trim11Q99PQ2 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.34□□□□□ -1.08
Trim11Q99PQ2 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.34□□□□□ -1.08
Trim11Q99PQ2 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm12874-201ENSMUST00000117190 913 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm11810-201ENSMUST00000118311 333 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm11433-201ENSMUST00000118318 228 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm15049-201ENSMUST00000120474 463 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm22226-201ENSMUST00000157355 109 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm24211-201ENSMUST00000158264 107 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm27218-201ENSMUST00000183745 392 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Mir8097-201ENSMUST00000185150 119 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm37225-201ENSMUST00000193423 325 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm20223-201ENSMUST00000199932 805 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm43558-201ENSMUST00000200155 210 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim11Q99PQ2 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms