Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CopaQ8CIE6 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.06□□□□□ -1.28
CopaQ8CIE6 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CopaQ8CIE6 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CopaQ8CIE6 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.06□□□□□ -1.28
CopaQ8CIE6 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CopaQ8CIE6 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm25760-201ENSMUST00000103989 132 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm14727-201ENSMUST00000118526 525 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm6142-201ENSMUST00000120290 325 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm14721-201ENSMUST00000121381 525 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm12181-201ENSMUST00000121448 531 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm22024-201ENSMUST00000122733 287 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm17022-201ENSMUST00000166415 922 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm2619-202ENSMUST00000166777 651 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm29747-201ENSMUST00000194764 585 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm29755-201ENSMUST00000196976 948 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm42983-201ENSMUST00000199879 815 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm43926-201ENSMUST00000203978 430 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.05□□□□□ -1.28
CopaQ8CIE6 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopaQ8CIE6 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm11858-201ENSMUST00000117935 838 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm14158-201ENSMUST00000118409 308 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm13702-201ENSMUST00000118542 825 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm15158-201ENSMUST00000120577 570 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm14796-201ENSMUST00000121216 959 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm11257-201ENSMUST00000121313 315 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Mir1907-201ENSMUST00000122509 90 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopaQ8CIE6 Gm10913-201ENSMUST00000133732 463 ntBASIC7.04□□□□□ -1.28
CopaQ8CIE6 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms