Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm25617-201ENSMUST00000179548 133 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm25617-202ENSMUST00000198387 132 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm13983-201ENSMUST00000118018 865 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm11501-201ENSMUST00000118039 581 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm14158-201ENSMUST00000118409 308 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm8534-201ENSMUST00000118553 766 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm5166-201ENSMUST00000121332 573 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm28918-201ENSMUST00000188822 699 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm18781-201ENSMUST00000211252 924 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm18377-201ENSMUST00000215141 607 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 AC153522.1-201ENSMUST00000220047 1090 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm35619-201ENSMUST00000222548 600 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Mir106b-201ENSMUST00000083580 82 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Brf1Q8CFK2 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Mir708-201ENSMUST00000102189 109 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Snord88a-201ENSMUST00000116723 90 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm13732-201ENSMUST00000117753 535 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm13222-201ENSMUST00000119638 138 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm20432-201ENSMUST00000173716 250 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm29036-201ENSMUST00000189967 877 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm29755-201ENSMUST00000196976 948 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm21054-201ENSMUST00000203981 380 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm18040-201ENSMUST00000217922 827 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm24621-201ENSMUST00000082679 140 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Brf1Q8CFK2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms