Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm14870-201ENSMUST00000118414 156 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm8534-201ENSMUST00000118553 766 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm11445-201ENSMUST00000119101 532 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm15149-201ENSMUST00000119370 360 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm6061-201ENSMUST00000175860 492 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm29197-201ENSMUST00000185922 702 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm42708-201ENSMUST00000196332 905 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm7986-201ENSMUST00000221336 551 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm10108-201ENSMUST00000078246 319 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.01□□□□□ -1.13
Vps54Q5SPW0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm28379-202ENSMUST00000187676 2896 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm28112-201ENSMUST00000190898 1875 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm12229-201ENSMUST00000120487 468 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm4997-201ENSMUST00000154056 360 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm9064-201ENSMUST00000163579 566 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm7463-201ENSMUST00000201541 547 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm17918-201ENSMUST00000205315 574 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8□□□□□ -1.13
Vps54Q5SPW0 CT030238.4-202ENSMUST00000226143 745 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 AC154618.2-201ENSMUST00000228299 452 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm37304-201ENSMUST00000193833 2886 ntBASIC8□□□□□ -1.13
Vps54Q5SPW0 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm6181-201ENSMUST00000117187 264 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm14513-201ENSMUST00000117403 123 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm6654-201ENSMUST00000118950 348 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm11370-201ENSMUST00000120583 260 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm14796-201ENSMUST00000121216 959 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm14747-201ENSMUST00000149888 984 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm25550-201ENSMUST00000158079 128 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm44265-201ENSMUST00000203631 465 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm5324-201ENSMUST00000208115 476 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vps54Q5SPW0 Gm18586-201ENSMUST00000217265 518 ntBASIC7.99□□□□□ -1.13
Vps54Q5SPW0 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms