Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm19560-201ENSMUST00000177510 514 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm18849-201ENSMUST00000189861 560 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm5990-201ENSMUST00000203126 746 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm44111-201ENSMUST00000204649 399 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 AC153870.1-201ENSMUST00000219599 560 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm38299-201ENSMUST00000193214 3789 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 AC122769.3-201ENSMUST00000227739 3245 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm14294-201ENSMUST00000119749 751 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm22820-201ENSMUST00000157205 329 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm25603-201ENSMUST00000158361 105 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Mir3062-201ENSMUST00000174986 105 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm27024-201ENSMUST00000182561 755 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm8009-201ENSMUST00000191672 436 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm15901-201ENSMUST00000117663 941 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm29357-201ENSMUST00000186877 698 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Igkv12-66-201ENSMUST00000199305 348 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm44768-201ENSMUST00000205719 393 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm46223-201ENSMUST00000215196 675 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm19116-201ENSMUST00000218592 642 ntBASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Shank3Q4ACU6 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Shank3Q4ACU6 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms