Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm12140-201ENSMUST00000121214 544 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm25780-201ENSMUST00000122528 253 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm16026-202ENSMUST00000159695 772 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm18358-201ENSMUST00000173179 1277 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm23139-201ENSMUST00000179454 132 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm8357-201ENSMUST00000181115 1011 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Mir8094-201ENSMUST00000183361 117 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm29156-201ENSMUST00000187764 499 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm38373-201ENSMUST00000192042 288 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm37463-201ENSMUST00000193819 796 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm7587-201ENSMUST00000207618 1021 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm45900-201ENSMUST00000211879 409 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm18585-201ENSMUST00000215197 556 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC154382.1-201ENSMUST00000220958 1282 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC154636.3-201ENSMUST00000221489 1214 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC154250.1-201ENSMUST00000224775 489 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm6369-201ENSMUST00000069626 412 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm22504-201ENSMUST00000082963 139 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm5446-201ENSMUST00000091762 784 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Gm37151-201ENSMUST00000194631 5007 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC154806.2-201ENSMUST00000227212 2385 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC169038.1-201ENSMUST00000227378 1352 ntBASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm43771-201ENSMUST00000202931 1578 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm17170-201ENSMUST00000112785 316 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm11799-201ENSMUST00000116110 460 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm14772-201ENSMUST00000116562 514 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm15596-201ENSMUST00000121139 784 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Mir1932-201ENSMUST00000157390 90 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Mir1983-201ENSMUST00000157523 132 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm16138-201ENSMUST00000159341 821 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm27155-201ENSMUST00000183716 898 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm38231-201ENSMUST00000192030 347 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm43546-201ENSMUST00000196721 943 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm42713-201ENSMUST00000202709 945 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Gm45136-201ENSMUST00000205793 943 ntBASIC9.07□□□□□ -0.96
Usp48Q3V0C5 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms