Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp39Q3TIX9 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm25344-201ENSMUST00000104503 132 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm14248-201ENSMUST00000117790 544 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm14893-201ENSMUST00000117904 282 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm13525-201ENSMUST00000120607 478 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm12583-201ENSMUST00000120677 853 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm15096-201ENSMUST00000121918 878 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm26323-201ENSMUST00000157743 175 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm29640-201ENSMUST00000187972 278 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm42673-201ENSMUST00000202676 337 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm44412-201ENSMUST00000203018 294 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm9652-201ENSMUST00000209345 163 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Usp39Q3TIX9 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Usp39Q3TIX9 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Usp39Q3TIX9 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm25414-201ENSMUST00000101814 107 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm14612-201ENSMUST00000121522 881 ntBASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Usp39Q3TIX9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms