Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 AC154198.1-201ENSMUST00000222839 424 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 AC114916.1-201ENSMUST00000228465 494 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm26003-201ENSMUST00000083061 113 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col8a1Q00780 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col8a1Q00780 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.34□□□□□ -1.4
Col8a1Q00780 Gm43544-201ENSMUST00000196474 2472 ntBASIC6.34□□□□□ -1.4
Col8a1Q00780 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Col8a1Q00780 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.34□□□□□ -1.4
Col8a1Q00780 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col8a1Q00780 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col8a1Q00780 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col8a1Q00780 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm37663-201ENSMUST00000191887 2299 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm13176-201ENSMUST00000117910 477 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm14836-201ENSMUST00000118567 471 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm8662-201ENSMUST00000118644 574 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm14837-201ENSMUST00000119688 206 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm12369-201ENSMUST00000121343 942 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm11990-201ENSMUST00000121505 897 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm16589-201ENSMUST00000159522 918 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm16113-201ENSMUST00000159629 372 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm6921-201ENSMUST00000161478 435 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm17091-201ENSMUST00000163248 357 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm4202-201ENSMUST00000169025 733 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm24327-201ENSMUST00000175108 78 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm27804-201ENSMUST00000185135 119 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm38166-201ENSMUST00000191660 471 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm38226-201ENSMUST00000192207 521 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm6074-201ENSMUST00000193340 451 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm4860-201ENSMUST00000200368 454 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm18645-201ENSMUST00000209593 651 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm18892-201ENSMUST00000217628 881 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC6.33□□□□□ -1.4
Col8a1Q00780 Gm2754-201ENSMUST00000223383 589 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.33□□□□□ -1.4
Col8a1Q00780 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col8a1Q00780 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms