Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm24451-201ENSMUST00000083353 133 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Gm23734-201ENSMUST00000083753 109 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rfx3P48381 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Rfx3P48381 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.06□□□□□ -1.44
Rfx3P48381 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rfx3P48381 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rfx3P48381 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm12635-201ENSMUST00000117285 752 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm16284-201ENSMUST00000140995 400 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm24442-201ENSMUST00000157238 327 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Mir1930-201ENSMUST00000158799 84 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm24756-201ENSMUST00000177002 96 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm29197-201ENSMUST00000185922 702 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21728-201ENSMUST00000188442 695 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21889-201ENSMUST00000188487 695 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20932-201ENSMUST00000189115 694 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Rfx3P48381 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21920-201ENSMUST00000190042 695 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Gm19185-201ENSMUST00000196365 643 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.05□□□□□ -1.44
Rfx3P48381 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.05□□□□□ -1.44
Rfx3P48381 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx3P48381 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
Rfx3P48381 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx3P48381 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx3P48381 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Rfx3P48381 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx3P48381 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx3P48381 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.04□□□□□ -1.44
Rfx3P48381 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx3P48381 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Rfx3P48381 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.04□□□□□ -1.44
Rfx3P48381 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx3P48381 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Rfx3P48381 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx3P48381 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.04□□□□□ -1.44
Rfx3P48381 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms