Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Cxcl12P40224 Gm24733-201ENSMUST00000158863 253 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Gm20432-201ENSMUST00000173716 250 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7□□□□□ -1.29
Cxcl12P40224 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7□□□□□ -1.29
Cxcl12P40224 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Gm43725-201ENSMUST00000200122 369 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Gm45026-201ENSMUST00000205292 833 ntBASIC7□□□□□ -1.29
Cxcl12P40224 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7□□□□□ -1.29
Cxcl12P40224 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 AC127242.4-201ENSMUST00000221242 470 ntBASIC7□□□□□ -1.29
Cxcl12P40224 AC139568.1-201ENSMUST00000222878 486 ntBASIC7□□□□□ -1.29
Cxcl12P40224 AC139197.1-201ENSMUST00000228332 813 ntBASIC7□□□□□ -1.29
Cxcl12P40224 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Gm43429-201ENSMUST00000197889 2251 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Cxcl12P40224 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7□□□□□ -1.29
Cxcl12P40224 Gm37321-201ENSMUST00000195742 1872 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cxcl12P40224 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Gm11242-201ENSMUST00000120103 2457 ntBASIC7□□□□□ -1.29
Cxcl12P40224 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cxcl12P40224 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cxcl12P40224 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cxcl12P40224 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Mir1932-201ENSMUST00000157390 90 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm43555-201ENSMUST00000196588 310 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm8058-201ENSMUST00000217247 587 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Cxcl12P40224 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cxcl12P40224 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.99□□□□□ -1.29
Cxcl12P40224 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cxcl12P40224 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.98□□□□□ -1.29
Cxcl12P40224 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.98□□□□□ -1.29
Cxcl12P40224 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cxcl12P40224 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms