Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm8502-201ENSMUST00000185708 901 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm21147-201ENSMUST00000186046 913 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm37689-201ENSMUST00000193139 275 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm43089-201ENSMUST00000199162 275 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Gm44487-201ENSMUST00000205145 325 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.95□□□□□ -1.14
Traf1P39428 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.95□□□□□ -1.14
Traf1P39428 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Traf1P39428 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Traf1P39428 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Traf1P39428 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.95□□□□□ -1.14
Traf1P39428 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Traf1P39428 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.95□□□□□ -1.14
Traf1P39428 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Traf1P39428 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Traf1P39428 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm11833-201ENSMUST00000118393 853 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm14716-201ENSMUST00000120138 718 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm12504-202ENSMUST00000148026 306 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm20454-201ENSMUST00000172713 221 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm9167-201ENSMUST00000182469 962 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm29470-201ENSMUST00000188007 696 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm18012-201ENSMUST00000204558 773 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.94□□□□□ -1.14
Traf1P39428 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm18040-201ENSMUST00000217922 827 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.94□□□□□ -1.14
Traf1P39428 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.94□□□□□ -1.14
Traf1P39428 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm24621-201ENSMUST00000082679 140 ntBASIC7.94□□□□□ -1.14
Traf1P39428 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.94□□□□□ -1.14
Traf1P39428 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.94□□□□□ -1.14
Traf1P39428 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Traf1P39428 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Traf1P39428 Gm12713-201ENSMUST00000118404 764 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.93□□□□□ -1.14
Traf1P39428 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 Gm10136-201ENSMUST00000183196 435 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm29605-201ENSMUST00000190800 292 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm19175-201ENSMUST00000199895 916 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm7351-201ENSMUST00000210745 580 ntBASIC7.93□□□□□ -1.14
Traf1P39428 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Traf1P39428 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.93□□□□□ -1.14
Traf1P39428 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.93□□□□□ -1.14
Traf1P39428 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.93□□□□□ -1.14
Traf1P39428 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms