Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.78□□□□□ -1.32
CopeO89079 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm12903-201ENSMUST00000121015 544 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm13221-201ENSMUST00000121712 430 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm11545-201ENSMUST00000146507 375 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm7502-201ENSMUST00000169235 733 ntBASIC6.78□□□□□ -1.32
CopeO89079 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Gm20549-201ENSMUST00000174804 429 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm20615-201ENSMUST00000177503 705 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm9274-201ENSMUST00000182505 984 ntBASIC6.78□□□□□ -1.32
CopeO89079 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.78□□□□□ -1.32
CopeO89079 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.78□□□□□ -1.32
CopeO89079 Gm8454-201ENSMUST00000196980 811 ntBASIC6.78□□□□□ -1.32
CopeO89079 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CopeO89079 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.78□□□□□ -1.32
CopeO89079 Gm31579-201ENSMUST00000203306 966 ntBASIC6.78□□□□□ -1.32
CopeO89079 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.78□□□□□ -1.32
CopeO89079 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.78□□□□□ -1.32
CopeO89079 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.78□□□□□ -1.32
CopeO89079 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CopeO89079 Gm4953-201ENSMUST00000077309 483 ntBASIC6.78□□□□□ -1.32
CopeO89079 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.78□□□□□ -1.32
CopeO89079 AC159264.1-202ENSMUST00000224856 3162 ntBASIC6.78□□□□□ -1.32
CopeO89079 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.78□□□□□ -1.32
CopeO89079 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CopeO89079 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.78□□□□□ -1.32
CopeO89079 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CopeO89079 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CopeO89079 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CopeO89079 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CopeO89079 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CopeO89079 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.77□□□□□ -1.33
CopeO89079 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.77□□□□□ -1.33
CopeO89079 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.77□□□□□ -1.33
CopeO89079 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.77□□□□□ -1.33
CopeO89079 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gm25757-201ENSMUST00000103986 123 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm23748-201ENSMUST00000104227 131 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.77□□□□□ -1.33
CopeO89079 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CopeO89079 Gm15054-201ENSMUST00000117393 281 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm13469-201ENSMUST00000118231 350 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm11976-201ENSMUST00000119236 295 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm14900-201ENSMUST00000120304 733 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm12229-201ENSMUST00000120487 468 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CopeO89079 Gm7244-201ENSMUST00000164658 455 ntBASIC6.77□□□□□ -1.33
CopeO89079 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gm26179-201ENSMUST00000177723 132 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm18709-201ENSMUST00000180564 489 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.77□□□□□ -1.33
CopeO89079 Gm35323-201ENSMUST00000191836 499 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm42573-201ENSMUST00000202327 478 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm4270-201ENSMUST00000209666 406 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm7780-201ENSMUST00000214787 406 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm6667-201ENSMUST00000217169 564 ntBASIC6.77□□□□□ -1.33
CopeO89079 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CopeO89079 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CopeO89079 Mir296-201ENSMUST00000083587 79 ntBASIC6.77□□□□□ -1.33
CopeO89079 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CopeO89079 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 AU020206-202ENSMUST00000206358 3009 ntBASIC6.77□□□□□ -1.33
CopeO89079 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CopeO89079 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CopeO89079 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.77□□□□□ -1.33
CopeO89079 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
CopeO89079 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.76□□□□□ -1.33
CopeO89079 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.76□□□□□ -1.33
CopeO89079 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Gm22710-201ENSMUST00000116892 125 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm7821-201ENSMUST00000117111 788 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms