Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm20770-201ENSMUST00000193474 694 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm43215-201ENSMUST00000199108 252 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm42886-201ENSMUST00000199214 466 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col4a6B1AVK5 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm22103-201ENSMUST00000116733 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm26475-201ENSMUST00000116769 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm23620-201ENSMUST00000116812 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm25042-201ENSMUST00000116856 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm25540-201ENSMUST00000116880 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm14870-201ENSMUST00000118414 156 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm12565-201ENSMUST00000119004 649 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm16511-201ENSMUST00000120019 564 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm23550-201ENSMUST00000179003 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm25123-201ENSMUST00000179154 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm25353-201ENSMUST00000179366 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm22992-201ENSMUST00000179496 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm25892-201ENSMUST00000179867 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm24092-201ENSMUST00000180257 121 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm4012-201ENSMUST00000221504 581 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm14796-201ENSMUST00000121216 959 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm22820-201ENSMUST00000157205 329 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Gm2539-203ENSMUST00000181352 746 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.87□□□□□ -1.31
Col4a6B1AVK5 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.87□□□□□ -1.31
Col4a6B1AVK5 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms