Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm22774-201ENSMUST00000102084 109 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm13183-201ENSMUST00000118615 789 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm15158-201ENSMUST00000120577 570 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm16248-201ENSMUST00000124238 243 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm26321-201ENSMUST00000157740 242 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm3760-201ENSMUST00000167475 804 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm29072-201ENSMUST00000191149 678 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm42782-201ENSMUST00000197286 522 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm2860-201ENSMUST00000199226 707 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm18907-201ENSMUST00000209719 932 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.39□□□□□ -1.39
Trim3Q9R1R2 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim3Q9R1R2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm11858-201ENSMUST00000117935 838 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm15048-201ENSMUST00000118201 954 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm14631-201ENSMUST00000119067 594 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm13444-201ENSMUST00000119445 522 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm25969-201ENSMUST00000157166 132 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm26025-201ENSMUST00000158655 271 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm8192-201ENSMUST00000182196 958 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm29357-201ENSMUST00000186877 698 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm18430-201ENSMUST00000197534 682 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm44565-201ENSMUST00000208194 269 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm2221-201ENSMUST00000209342 418 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm45739-201ENSMUST00000213094 388 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms