Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 AC116726.2-201ENSMUST00000217629 986 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm9118-201ENSMUST00000219246 754 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 AC154487.1-201ENSMUST00000224649 226 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 AC163038.4-201ENSMUST00000224942 474 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 CT025525.3-201ENSMUST00000228858 366 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm24522-201ENSMUST00000083964 108 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm37630-201ENSMUST00000194210 1456 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm44165-201ENSMUST00000203093 1469 ntBASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ube3bQ9ES34 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm25083-201ENSMUST00000102319 92 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm11416-201ENSMUST00000119111 863 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm5759-201ENSMUST00000119203 811 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm14883-201ENSMUST00000120179 157 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm17973-201ENSMUST00000174509 520 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm5445-201ENSMUST00000180224 480 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm21181-201ENSMUST00000186249 330 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm28859-201ENSMUST00000186650 616 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm29389-201ENSMUST00000191562 352 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm43108-201ENSMUST00000200525 293 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 AC120011.1-201ENSMUST00000202147 744 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm44380-201ENSMUST00000203125 293 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 AC118006.3-201ENSMUST00000223948 1176 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Olfr197-201ENSMUST00000080031 926 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 n-R5s196-201ENSMUST00000083136 117 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ube3bQ9ES34 AC120347.1-201ENSMUST00000223326 1639 ntBASIC9.13□□□□□ -0.95
Ube3bQ9ES34 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm15159-201ENSMUST00000117062 764 ntBASIC9.12□□□□□ -0.95
Ube3bQ9ES34 Gm14122-201ENSMUST00000122076 973 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms