Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm18875-201ENSMUST00000188563 882 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm5305-201ENSMUST00000204010 746 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Lima1Q9ERG0 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Mir688-201ENSMUST00000102055 75 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm26416-201ENSMUST00000104280 134 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm8534-201ENSMUST00000118553 766 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm11498-201ENSMUST00000120660 949 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm25722-201ENSMUST00000157498 279 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm8245-201ENSMUST00000182434 987 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm29072-201ENSMUST00000191149 678 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm43157-201ENSMUST00000198223 412 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm8804-201ENSMUST00000212292 798 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm23734-201ENSMUST00000083753 109 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lima1Q9ERG0 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm12635-201ENSMUST00000117285 752 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm13900-201ENSMUST00000119402 498 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm13222-201ENSMUST00000119638 138 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm12903-201ENSMUST00000121015 544 ntBASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lima1Q9ERG0 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms