Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm23378-201ENSMUST00000082942 107 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm24871-201ENSMUST00000083099 116 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm25099-201ENSMUST00000093716 116 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Rnu5g-201ENSMUST00000093721 116 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm5975-201ENSMUST00000185256 1399 ntBASIC7.68□□□□□ -1.18
Trim42Q9D2H5 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim42Q9D2H5 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12365-201ENSMUST00000117931 568 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm6654-201ENSMUST00000118950 348 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12844-201ENSMUST00000119463 582 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm4910-201ENSMUST00000119605 366 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12955-201ENSMUST00000119689 957 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12206-201ENSMUST00000119795 601 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm11410-201ENSMUST00000120053 1143 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm11866-201ENSMUST00000120209 335 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12103-201ENSMUST00000121892 362 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm24854-201ENSMUST00000158025 98 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm6669-201ENSMUST00000179088 997 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm23945-201ENSMUST00000179609 92 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm28614-201ENSMUST00000186483 458 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm37383-201ENSMUST00000191750 745 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm43237-201ENSMUST00000196835 1044 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Igkv12-42-201ENSMUST00000198769 327 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm5338-201ENSMUST00000209530 639 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Dppa5b-201ENSMUST00000214261 348 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Dppa5c-201ENSMUST00000216268 348 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm6477-201ENSMUST00000217098 764 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC101831.1-201ENSMUST00000228245 691 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm7099-201ENSMUST00000080066 554 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 mt-Tr-201ENSMUST00000082412 68 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 AC139754.3-201ENSMUST00000220444 1627 ntBASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trim42Q9D2H5 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.66□□□□□ -1.18
Trim42Q9D2H5 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms