Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm16027-201ENSMUST00000161618 758 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm27360-201ENSMUST00000183487 80 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Mir6989-201ENSMUST00000184812 65 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm17834-201ENSMUST00000204322 891 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.62□□□□□ -1.19
Smc1aQ9CU62 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm10913-201ENSMUST00000133732 463 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm6428-201ENSMUST00000161062 345 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm17212-201ENSMUST00000166666 259 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm3760-201ENSMUST00000167475 804 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm29464-201ENSMUST00000187692 513 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm37295-201ENSMUST00000192186 109 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm2860-201ENSMUST00000199226 707 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm43772-201ENSMUST00000202052 379 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm7351-201ENSMUST00000210745 580 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm35638-201ENSMUST00000220724 652 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm18955-201ENSMUST00000223173 649 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Smc1aQ9CU62 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm25498-201ENSMUST00000104424 129 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm15158-201ENSMUST00000120577 570 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm22728-201ENSMUST00000158087 129 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm3344-201ENSMUST00000169610 603 ntBASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Smc1aQ9CU62 Gm27018-201ENSMUST00000181136 225 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms