Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm37100-201ENSMUST00000193344 1353 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm14849-201ENSMUST00000122293 2846 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC122357.2-201ENSMUST00000220732 1525 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm25315-201ENSMUST00000116823 121 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm14751-201ENSMUST00000117693 222 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm16007-201ENSMUST00000117837 286 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm12225-201ENSMUST00000117995 298 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm13902-201ENSMUST00000120168 605 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm12642-201ENSMUST00000121098 876 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm14623-201ENSMUST00000121398 603 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm26729-201ENSMUST00000180744 352 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm28661-201ENSMUST00000188231 681 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm29195-201ENSMUST00000189038 379 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm28927-201ENSMUST00000191528 272 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm43659-201ENSMUST00000200894 628 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC152979.4-201ENSMUST00000219893 379 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC144628.1-201ENSMUST00000227943 466 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 AC165437.1-201ENSMUST00000228640 536 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm44739-201ENSMUST00000205294 1426 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.35□□□□□ -1.07
Trim11Q99PQ2 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim11Q99PQ2 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm24142-201ENSMUST00000101960 107 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Mir763-201ENSMUST00000103249 120 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm22195-201ENSMUST00000116861 108 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm13742-201ENSMUST00000118805 457 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm11928-201ENSMUST00000119323 437 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm12819-201ENSMUST00000122223 629 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm24190-201ENSMUST00000157976 216 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm23046-201ENSMUST00000158369 284 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm16563-201ENSMUST00000162673 423 ntBASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim11Q99PQ2 Gm19224-201ENSMUST00000190477 793 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms