Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.7□□□□□ -1.34
Clrn1Q8K445 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.7□□□□□ -1.34
Clrn1Q8K445 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.7□□□□□ -1.34
Clrn1Q8K445 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Clrn1Q8K445 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Snord65-201ENSMUST00000104269 72 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm15203-201ENSMUST00000117668 455 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm13878-201ENSMUST00000117986 577 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm15739-201ENSMUST00000118049 872 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm12140-201ENSMUST00000121214 544 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm13502-201ENSMUST00000121574 684 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm16359-201ENSMUST00000124511 289 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm10157-201ENSMUST00000139408 343 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm16357-201ENSMUST00000144091 474 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm23392-201ENSMUST00000157580 113 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm24057-201ENSMUST00000158616 302 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm2966-201ENSMUST00000166052 481 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm17204-201ENSMUST00000167936 478 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm23639-201ENSMUST00000175078 132 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm27039-201ENSMUST00000182438 962 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Pea15b-201ENSMUST00000182806 387 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm35570-201ENSMUST00000198730 681 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm44943-201ENSMUST00000207254 300 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm23448-201ENSMUST00000083151 104 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Clrn1Q8K445 Grik1-209ENSMUST00000227986 2942 ntBASIC6.69□□□□□ -1.34
Clrn1Q8K445 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms