Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm15007-201ENSMUST00000119982 710 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm21990-201ENSMUST00000124692 383 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm6726-201ENSMUST00000172786 681 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm27468-201ENSMUST00000183577 106 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Mir6908-201ENSMUST00000184056 63 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm5711-201ENSMUST00000197896 421 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm19885-201ENSMUST00000212853 343 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC122937.2-201ENSMUST00000228258 1051 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm23748-201ENSMUST00000104227 131 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm15311-201ENSMUST00000119682 282 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm15305-201ENSMUST00000120354 288 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm14776-201ENSMUST00000121029 887 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm23164-201ENSMUST00000175084 111 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm7891-201ENSMUST00000190284 843 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm37493-201ENSMUST00000193167 433 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm43894-201ENSMUST00000203274 688 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm44607-201ENSMUST00000205611 1090 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm2754-201ENSMUST00000223383 589 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Brf1Q8CFK2 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.13□□□□□ -1.11
Brf1Q8CFK2 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm23485-201ENSMUST00000104181 155 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm12447-201ENSMUST00000119110 470 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm11553-201ENSMUST00000120682 240 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm14353-201ENSMUST00000122200 869 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Brf1Q8CFK2 Gm20615-201ENSMUST00000177503 705 ntBASIC8.12□□□□□ -1.11
Brf1Q8CFK2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms