Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm25379-201ENSMUST00000104338 114 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26486-201ENSMUST00000158021 110 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3760-201ENSMUST00000167475 804 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm7502-201ENSMUST00000169235 733 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26381-201ENSMUST00000174895 92 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm27178-201ENSMUST00000184962 340 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8539-201ENSMUST00000199822 501 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3678-201ENSMUST00000218888 492 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc28aQ8CEI3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm13900-201ENSMUST00000119402 498 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm13221-201ENSMUST00000121712 430 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20549-201ENSMUST00000174804 429 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20615-201ENSMUST00000177503 705 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43157-201ENSMUST00000198223 412 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43141-201ENSMUST00000199695 274 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20274-201ENSMUST00000206967 584 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm7780-201ENSMUST00000214787 406 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Mir296-201ENSMUST00000083587 79 ntBASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28aQ8CEI3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms