Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trub1Q8C0D0 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.89□□□□□ -1.31
Trub1Q8C0D0 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Snord88a-201ENSMUST00000116723 90 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm12135-201ENSMUST00000119170 466 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm15149-201ENSMUST00000119370 360 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm12229-201ENSMUST00000120487 468 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm7599-201ENSMUST00000121453 796 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm14038-201ENSMUST00000121500 807 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm26381-201ENSMUST00000174895 92 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm44411-201ENSMUST00000204172 349 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm24411-201ENSMUST00000083428 131 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trub1Q8C0D0 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.88□□□□□ -1.31
Trub1Q8C0D0 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm2178-201ENSMUST00000104927 357 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm11498-201ENSMUST00000120660 949 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm15349-201ENSMUST00000121154 204 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm5456-201ENSMUST00000170706 844 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm17045-201ENSMUST00000178600 844 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Mir7033-201ENSMUST00000184259 81 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm27970-201ENSMUST00000184854 407 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm29496-201ENSMUST00000189854 693 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm4585-201ENSMUST00000207218 452 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm17997-201ENSMUST00000211801 840 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Gm17849-201ENSMUST00000219788 853 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.87□□□□□ -1.31
Trub1Q8C0D0 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms