Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
ClpbQ60649 Mir6908-201ENSMUST00000184056 63 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Mir8105-201ENSMUST00000184718 89 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm8480-201ENSMUST00000190350 698 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm18430-201ENSMUST00000197534 682 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm9710-201ENSMUST00000198053 499 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm3511-201ENSMUST00000199823 204 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm2221-201ENSMUST00000209342 418 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 AC110816.1-201ENSMUST00000218559 980 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm19189-201ENSMUST00000221689 754 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ClpbQ60649 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
ClpbQ60649 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ClpbQ60649 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.58□□□□□ -1.36
ClpbQ60649 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ClpbQ60649 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm14796-201ENSMUST00000121216 959 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm16248-201ENSMUST00000124238 243 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm24157-201ENSMUST00000175265 111 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm2058-201ENSMUST00000178791 560 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Mir7212-201ENSMUST00000184098 61 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.57□□□□□ -1.36
ClpbQ60649 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm34144-201ENSMUST00000197039 259 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm44683-201ENSMUST00000209088 484 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm31711-201ENSMUST00000220687 196 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ClpbQ60649 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm5446-201ENSMUST00000091762 784 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ClpbQ60649 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ClpbQ60649 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.57□□□□□ -1.36
ClpbQ60649 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ClpbQ60649 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.57□□□□□ -1.36
ClpbQ60649 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.57□□□□□ -1.36
ClpbQ60649 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.56□□□□□ -1.36
ClpbQ60649 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.56□□□□□ -1.36
ClpbQ60649 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ClpbQ60649 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms