Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Ebf1Q07802 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.36□□□□□ -1.23
Ebf1Q07802 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm22426-201ENSMUST00000103811 96 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm15209-201ENSMUST00000117703 400 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm12713-201ENSMUST00000118404 764 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm2288-201ENSMUST00000118560 638 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm11850-201ENSMUST00000119679 479 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm2735-201ENSMUST00000136133 277 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm22882-201ENSMUST00000157749 124 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm15256-201ENSMUST00000177793 883 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm8321-201ENSMUST00000181691 980 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Mir6357-201ENSMUST00000184246 104 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm5261-201ENSMUST00000185860 713 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm29143-201ENSMUST00000189462 201 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm36928-201ENSMUST00000192466 694 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm37325-201ENSMUST00000194971 694 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm31306-201ENSMUST00000197517 508 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm44856-201ENSMUST00000206639 304 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC7.35□□□□□ -1.23
Ebf1Q07802 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm5087-204ENSMUST00000225820 645 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Ebf1Q07802 AC099612.2-201ENSMUST00000226824 721 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm20302-201ENSMUST00000080671 275 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Ebf1Q07802 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.35□□□□□ -1.23
Ebf1Q07802 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Ebf1Q07802 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.35□□□□□ -1.23
Ebf1Q07802 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.34□□□□□ -1.23
Ebf1Q07802 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.34□□□□□ -1.23
Ebf1Q07802 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.34□□□□□ -1.23
Ebf1Q07802 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ebf1Q07802 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm14906-201ENSMUST00000119265 390 ntBASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm14554-201ENSMUST00000119548 661 ntBASIC7.34□□□□□ -1.23
Ebf1Q07802 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm14990-201ENSMUST00000122354 445 ntBASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC7.34□□□□□ -1.23
Ebf1Q07802 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms