Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm4853-201ENSMUST00000119359 394 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm21990-201ENSMUST00000124692 383 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm22600-201ENSMUST00000157598 269 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm22530-201ENSMUST00000158820 118 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm16138-201ENSMUST00000159341 821 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm18396-201ENSMUST00000177095 361 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm27156-201ENSMUST00000184589 754 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm29385-201ENSMUST00000186831 363 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm38373-201ENSMUST00000192042 288 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm24826-202ENSMUST00000197298 216 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm44865-201ENSMUST00000207240 531 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm19217-201ENSMUST00000218238 328 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Gm22684-201ENSMUST00000082849 132 ntBASIC6.35□□□□□ -1.39
Col8a1Q00780 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col8a1Q00780 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col8a1Q00780 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 AC154347.1-201ENSMUST00000221358 3105 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Rian-209ENSMUST00000182406 3476 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm8569-201ENSMUST00000117630 647 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm13486-201ENSMUST00000119910 282 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm25782-201ENSMUST00000122526 289 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm16563-201ENSMUST00000162673 423 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm23450-201ENSMUST00000178285 91 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.34□□□□□ -1.39
Col8a1Q00780 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm43582-201ENSMUST00000196149 343 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm43367-201ENSMUST00000199986 625 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col8a1Q00780 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm45626-201ENSMUST00000210093 361 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm38574-201ENSMUST00000211855 640 ntBASIC6.34□□□□□ -1.39
Col8a1Q00780 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms