Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm44075-201ENSMUST00000204208 216 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.72□□□□□ -1.01
Smarcc1P97496 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 AC121804.1-201ENSMUST00000221016 394 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.72□□□□□ -1.01
Smarcc1P97496 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Smarcc1P97496 Gm22865-201ENSMUST00000083949 214 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Smarcc1P97496 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Smarcc1P97496 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.72□□□□□ -1.01
Smarcc1P97496 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Smarcc1P97496 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Smarcc1P97496 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Smarcc1P97496 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Smarcc1P97496 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Smarcc1P97496 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Smarcc1P97496 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.01
Smarcc1P97496 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.71□□□□□ -1.01
Smarcc1P97496 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Smarcc1P97496 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.71□□□□□ -1.01
Smarcc1P97496 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Smarcc1P97496 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm22370-201ENSMUST00000102422 83 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm4853-201ENSMUST00000119359 394 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm12518-201ENSMUST00000122075 779 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm17137-202ENSMUST00000165729 957 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm8919-201ENSMUST00000182028 1014 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm27295-201ENSMUST00000184264 153 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm42580-201ENSMUST00000197223 753 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm18586-201ENSMUST00000217265 518 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.71□□□□□ -1.02
Smarcc1P97496 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 CT009556.1-201ENSMUST00000227282 449 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
Smarcc1P97496 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Smarcc1P97496 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.71□□□□□ -1.02
Smarcc1P97496 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Smarcc1P97496 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm11821-201ENSMUST00000117335 979 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Mir1932-201ENSMUST00000157390 90 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm25904-201ENSMUST00000158491 143 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm2229-201ENSMUST00000193328 710 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm5694-201ENSMUST00000195648 641 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm19185-201ENSMUST00000196365 643 ntBASIC8.7□□□□□ -1.02
Smarcc1P97496 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms