Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Msh6P54276 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Msh6P54276 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Msh6P54276 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Msh6P54276 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Msh6P54276 Gm25782-201ENSMUST00000122526 289 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.61□□□□□ -1.03
Msh6P54276 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.61□□□□□ -1.03
Msh6P54276 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.61□□□□□ -1.03
Msh6P54276 Gm20615-201ENSMUST00000177503 705 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Gm17048-201ENSMUST00000179266 847 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Mir6348-201ENSMUST00000183804 120 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Gm28918-201ENSMUST00000188822 699 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Gm43233-201ENSMUST00000200491 616 ntBASIC8.61□□□□□ -1.03
Msh6P54276 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm18586-201ENSMUST00000217265 518 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm35619-201ENSMUST00000222548 600 ntBASIC8.61□□□□□ -1.03
Msh6P54276 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Msh6P54276 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Msh6P54276 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Msh6P54276 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.61□□□□□ -1.03
Msh6P54276 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Msh6P54276 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Msh6P54276 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Msh6P54276 Gm13702-201ENSMUST00000118542 825 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm4342-201ENSMUST00000118982 367 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm26410-201ENSMUST00000157670 261 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Msh6P54276 Gm29357-201ENSMUST00000186877 698 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm7463-201ENSMUST00000201541 547 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm7554-201ENSMUST00000202282 574 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm43501-201ENSMUST00000202513 107 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.61□□□□□ -1.03
Msh6P54276 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC8.61□□□□□ -1.03
Msh6P54276 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Msh6P54276 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.61□□□□□ -1.03
Msh6P54276 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.61□□□□□ -1.03
Msh6P54276 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.61□□□□□ -1.03
Msh6P54276 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.61□□□□□ -1.03
Msh6P54276 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Msh6P54276 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Msh6P54276 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Msh6P54276 Gm13835-201ENSMUST00000118459 685 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm7113-201ENSMUST00000120477 958 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.6□□□□□ -1.03
Msh6P54276 Gm26455-201ENSMUST00000175300 92 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm22132-201ENSMUST00000175316 100 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Msh6P54276 Gm28620-201ENSMUST00000190463 439 ntBASIC8.6□□□□□ -1.03
Msh6P54276 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.6□□□□□ -1.03
Msh6P54276 Gm3800-201ENSMUST00000221086 554 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms