Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Shmt1P50431 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm24048-201ENSMUST00000102411 106 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.32□□□□□ -1.24
Shmt1P50431 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm14791-201ENSMUST00000119061 1166 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm24545-201ENSMUST00000158651 85 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.32□□□□□ -1.24
Shmt1P50431 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Mir7033-201ENSMUST00000184259 81 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm29141-201ENSMUST00000190357 882 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm43141-201ENSMUST00000199695 274 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm44227-201ENSMUST00000203576 241 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm44038-201ENSMUST00000203952 889 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Shmt1P50431 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.32□□□□□ -1.24
Shmt1P50431 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Shmt1P50431 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Shmt1P50431 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm25877-201ENSMUST00000104326 129 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm13626-201ENSMUST00000119435 402 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm14908-201ENSMUST00000120930 1286 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm12929-201ENSMUST00000122406 370 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.31□□□□□ -1.24
Shmt1P50431 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm26357-201ENSMUST00000158218 115 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm16112-201ENSMUST00000159075 382 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm13147-202ENSMUST00000177526 1173 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms