Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm13006-201ENSMUST00000118683 214 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm11945-201ENSMUST00000120551 476 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm8865-201ENSMUST00000125697 430 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm23497-201ENSMUST00000157738 130 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.63□□□□□ -1.03
Rfx1P48377 Mir8097-201ENSMUST00000185150 119 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm29126-201ENSMUST00000188686 151 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm29168-201ENSMUST00000189953 687 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm17965-201ENSMUST00000193904 517 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm8891-201ENSMUST00000198546 832 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Gm45379-201ENSMUST00000211772 549 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC8.63□□□□□ -1.03
Rfx1P48377 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.63□□□□□ -1.03
Rfx1P48377 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rfx1P48377 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.63□□□□□ -1.03
Rfx1P48377 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm22150-201ENSMUST00000104447 135 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.62□□□□□ -1.03
Rfx1P48377 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.62□□□□□ -1.03
Rfx1P48377 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm13521-201ENSMUST00000118922 866 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm12287-201ENSMUST00000119770 707 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm15836-201ENSMUST00000119952 793 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm8084-201ENSMUST00000120807 752 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.62□□□□□ -1.03
Rfx1P48377 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm23164-201ENSMUST00000175084 111 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm26455-201ENSMUST00000175300 92 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm22392-201ENSMUST00000177971 107 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm26436-201ENSMUST00000180325 132 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm4891-201ENSMUST00000182279 912 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm17970-201ENSMUST00000192199 685 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm37689-201ENSMUST00000193139 275 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 AC154296.3-201ENSMUST00000214427 712 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 CT573422.1-201ENSMUST00000216655 405 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 AC117656.3-205ENSMUST00000224606 1205 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 AC107663.3-201ENSMUST00000225873 601 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm10704-201ENSMUST00000098952 730 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms