Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.32□□□□□ -1.4
Sox6P40645 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox6P40645 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sox6P40645 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Sox6P40645 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.31□□□□□ -1.4
Sox6P40645 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Mir697-201ENSMUST00000102316 109 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Sox6P40645 Gm25498-201ENSMUST00000104424 129 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm13930-201ENSMUST00000118569 368 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm13744-201ENSMUST00000118953 850 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm5319-201ENSMUST00000118965 873 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm24442-201ENSMUST00000157238 327 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Gm20549-201ENSMUST00000174804 429 ntBASIC6.31□□□□□ -1.4
Sox6P40645 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm42580-201ENSMUST00000197223 753 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm30517-201ENSMUST00000197350 772 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm18430-201ENSMUST00000197534 682 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm5305-201ENSMUST00000204010 746 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Gm19092-201ENSMUST00000209036 969 ntBASIC6.31□□□□□ -1.4
Sox6P40645 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox6P40645 Gm5528-201ENSMUST00000076314 480 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Snora21-201ENSMUST00000082967 137 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.31□□□□□ -1.4
Sox6P40645 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox6P40645 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.31□□□□□ -1.4
Sox6P40645 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox6P40645 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.3□□□□□ -1.4
Sox6P40645 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Gm13900-201ENSMUST00000119402 498 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm15153-201ENSMUST00000119867 274 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm12104-201ENSMUST00000120359 979 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm26480-201ENSMUST00000122619 297 ntBASIC6.3□□□□□ -1.4
Sox6P40645 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Gm23018-201ENSMUST00000177928 109 ntBASIC6.3□□□□□ -1.4
Sox6P40645 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Gm7412-201ENSMUST00000191692 605 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm43160-201ENSMUST00000196453 421 ntBASIC6.3□□□□□ -1.4
Sox6P40645 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.3□□□□□ -1.4
Sox6P40645 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.3□□□□□ -1.4
Sox6P40645 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sox6P40645 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.3□□□□□ -1.4
Sox6P40645 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.3□□□□□ -1.4
Sox6P40645 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm5436-201ENSMUST00000058103 643 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sox6P40645 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox6P40645 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox6P40645 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.3□□□□□ -1.4
Sox6P40645 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms