Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Hoxd3P09027 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ftsj1-203ENSMUST00000115595 1656 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 AC123832.1-201ENSMUST00000214120 2371 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Recql-203ENSMUST00000111803 3389 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm11914-201ENSMUST00000117094 507 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm15266-201ENSMUST00000119635 255 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm13666-201ENSMUST00000120032 799 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm7071-201ENSMUST00000120458 462 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm12163-201ENSMUST00000121597 389 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm12041-201ENSMUST00000121606 602 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm12924-201ENSMUST00000121747 318 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm24444-201ENSMUST00000157244 308 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm23259-201ENSMUST00000158318 303 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm26436-201ENSMUST00000180325 132 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm21654-201ENSMUST00000188086 691 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm6394-201ENSMUST00000197077 477 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Hoxd3P09027 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm5609-201ENSMUST00000210008 1267 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm46193-201ENSMUST00000219399 364 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm2099-201ENSMUST00000220979 412 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 AC154849.1-201ENSMUST00000224873 960 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm23614-201ENSMUST00000082598 107 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm28229-201ENSMUST00000188747 2153 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm37210-201ENSMUST00000192484 2004 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm21129-201ENSMUST00000185932 2560 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm29258-201ENSMUST00000186842 2564 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Gm28451-201ENSMUST00000189311 2560 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Hoxd3P09027 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.52□□□□□ -1.37
Hoxd3P09027 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm12430-201ENSMUST00000121539 1322 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms