Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
Hmgb3O54879 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hmgb3O54879 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.42□□□□□ -1.54
Hmgb3O54879 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb3O54879 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
Hmgb3O54879 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 AU020206-202ENSMUST00000206358 3009 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm37535-201ENSMUST00000194442 2365 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm25608-201ENSMUST00000104021 132 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm17170-201ENSMUST00000112785 316 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm13196-201ENSMUST00000118297 379 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm11318-201ENSMUST00000118640 961 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm14631-201ENSMUST00000119067 594 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm13222-201ENSMUST00000119638 138 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm11498-201ENSMUST00000120660 949 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm3208-201ENSMUST00000168281 427 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm9167-201ENSMUST00000182469 962 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Mir6415-201ENSMUST00000184064 100 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Mir378d-201ENSMUST00000184232 110 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Mir8120-201ENSMUST00000185035 139 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm37729-201ENSMUST00000194761 1172 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm43436-201ENSMUST00000199308 147 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm43926-201ENSMUST00000203978 430 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm5027-201ENSMUST00000206700 375 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm19217-201ENSMUST00000218238 328 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm8616-201ENSMUST00000222175 1037 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm33312-201ENSMUST00000222443 332 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm18619-201ENSMUST00000222722 1147 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 AC154747.4-202ENSMUST00000223826 852 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 AC140208.1-201ENSMUST00000226609 285 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.41□□□□□ -1.54
Hmgb3O54879 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb3O54879 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm6491-201ENSMUST00000118273 990 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm15484-201ENSMUST00000118871 828 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms