Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm24519-201ENSMUST00000104507 132 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm6987-201ENSMUST00000119319 428 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Mir1929-201ENSMUST00000158635 93 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm24228-201ENSMUST00000158829 129 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm4373-201ENSMUST00000178571 556 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm9357-201ENSMUST00000207138 805 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm2221-201ENSMUST00000209342 418 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm46231-201ENSMUST00000220152 314 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm9267-201ENSMUST00000222831 404 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cdc40Q9DC48 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm16073-201ENSMUST00000116032 517 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm15081-201ENSMUST00000119794 844 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm11796-201ENSMUST00000120208 972 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm25969-201ENSMUST00000157166 132 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm17217-201ENSMUST00000166613 469 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm27360-201ENSMUST00000183487 80 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm36965-201ENSMUST00000193797 394 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm10416-201ENSMUST00000197379 645 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm44896-201ENSMUST00000206190 772 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm7351-201ENSMUST00000210745 580 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm3678-201ENSMUST00000218888 492 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm26130-201ENSMUST00000083171 138 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdc40Q9DC48 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.34□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 235.6 ms