Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm25083-201ENSMUST00000102319 92 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm8421-201ENSMUST00000119439 305 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm12477-201ENSMUST00000121221 571 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm26480-201ENSMUST00000122619 297 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm22035-201ENSMUST00000157284 228 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm25669-201ENSMUST00000157699 112 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Pea15b-201ENSMUST00000182806 387 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm18752-201ENSMUST00000192876 608 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm4605-201ENSMUST00000203148 625 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm9038-201ENSMUST00000203400 604 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm8703-201ENSMUST00000203793 730 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm44656-201ENSMUST00000208428 490 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm19196-201ENSMUST00000209258 357 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm4822-201ENSMUST00000077551 479 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Ddx56Q9D0R4 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Mir697-201ENSMUST00000102316 109 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm14893-201ENSMUST00000117904 282 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm5135-201ENSMUST00000121100 573 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm6726-201ENSMUST00000172786 681 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm23639-201ENSMUST00000175078 132 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm28413-201ENSMUST00000189369 291 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm18348-201ENSMUST00000191227 820 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm37857-201ENSMUST00000191784 1199 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm37669-201ENSMUST00000192184 820 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm9240-201ENSMUST00000206527 742 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm4574-201ENSMUST00000207804 542 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm6667-201ENSMUST00000217169 564 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm5528-201ENSMUST00000076314 480 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms