Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm13423-201ENSMUST00000117205 888 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm15185-201ENSMUST00000117397 746 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm8569-201ENSMUST00000117630 647 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm12710-201ENSMUST00000119011 216 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm12287-201ENSMUST00000119770 707 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm13282-201ENSMUST00000121577 545 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm26357-201ENSMUST00000158218 115 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm8046-201ENSMUST00000172151 616 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm23604-202ENSMUST00000198428 137 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm18131-201ENSMUST00000199241 449 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm43232-201ENSMUST00000201346 364 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm45008-201ENSMUST00000206420 493 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm5250-201ENSMUST00000059065 321 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim11Q99PQ2 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Mir669d-2-201ENSMUST00000116854 86 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm15481-201ENSMUST00000120264 539 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm14053-201ENSMUST00000121662 470 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm22795-201ENSMUST00000157233 118 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm26413-202ENSMUST00000198972 127 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm45446-201ENSMUST00000209348 216 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm18562-201ENSMUST00000209949 915 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm45454-201ENSMUST00000211484 455 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm7333-201ENSMUST00000213449 1060 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AV026068-224ENSMUST00000224827 928 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 AC158981.3-202ENSMUST00000228906 523 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gm15500-201ENSMUST00000071523 894 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim11Q99PQ2 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms