Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mir5100-201ENSMUST00000174993 64 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm22690-201ENSMUST00000175054 110 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm17786-201ENSMUST00000182000 427 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm9167-201ENSMUST00000182469 962 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm28117-201ENSMUST00000188472 371 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm28665-201ENSMUST00000189269 670 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm38328-201ENSMUST00000195582 317 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm44979-201ENSMUST00000206218 287 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm26417-201ENSMUST00000104274 135 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm12931-201ENSMUST00000117046 324 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm15105-201ENSMUST00000117777 204 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm15586-201ENSMUST00000121218 528 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm23392-201ENSMUST00000157580 113 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm25180-201ENSMUST00000157746 115 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm24756-201ENSMUST00000177002 96 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm26179-201ENSMUST00000177723 132 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm27026-201ENSMUST00000183003 892 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm28801-201ENSMUST00000188761 449 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm37102-201ENSMUST00000195740 1105 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm26413-201ENSMUST00000196783 126 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf3Q99LI7 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.56□□□□□ -1.36
Cstf3Q99LI7 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms