Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Cmah-208ENSMUST00000224819 9482 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm13735-201ENSMUST00000120217 670 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm24157-201ENSMUST00000175265 111 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Mir8105-201ENSMUST00000184718 89 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm29383-201ENSMUST00000188284 480 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm3841-201ENSMUST00000191399 451 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm8920-201ENSMUST00000196153 924 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm44342-201ENSMUST00000196874 129 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm44383-201ENSMUST00000198940 129 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm45122-201ENSMUST00000206376 784 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Prpf39Q8K2Z2 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Mir708-201ENSMUST00000102189 109 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm12468-201ENSMUST00000116189 404 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm12447-201ENSMUST00000119110 470 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm12174-201ENSMUST00000119853 813 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm6142-201ENSMUST00000120290 325 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm14613-201ENSMUST00000122239 752 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm24545-201ENSMUST00000158651 85 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm28665-201ENSMUST00000189269 670 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm36965-201ENSMUST00000193797 394 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm44147-201ENSMUST00000204658 94 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm4585-201ENSMUST00000207218 452 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm45279-201ENSMUST00000210315 391 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Prpf39Q8K2Z2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms