Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm15349-201ENSMUST00000121154 204 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm6434-201ENSMUST00000163316 372 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm6061-201ENSMUST00000175860 492 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Mir7033-201ENSMUST00000184259 81 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Mir6987-201ENSMUST00000184789 73 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm21728-201ENSMUST00000188442 695 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm21889-201ENSMUST00000188487 695 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20932-201ENSMUST00000189115 694 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm28665-201ENSMUST00000189269 670 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm21920-201ENSMUST00000190042 695 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm3841-201ENSMUST00000191399 451 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20239-201ENSMUST00000196610 982 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm43089-201ENSMUST00000199162 275 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm44411-201ENSMUST00000204172 349 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm44582-201ENSMUST00000209125 445 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm8679-201ENSMUST00000210651 1036 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm13141-201ENSMUST00000117417 456 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm15842-201ENSMUST00000120513 618 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm22523-201ENSMUST00000158696 100 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm27185-201ENSMUST00000184296 247 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm7867-201ENSMUST00000189856 546 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm28745-201ENSMUST00000190069 305 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm37620-201ENSMUST00000192910 501 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm18559-201ENSMUST00000208249 604 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm9985-201ENSMUST00000044101 510 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brf1Q8CFK2 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Brf1Q8CFK2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Brf1Q8CFK2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.11
Brf1Q8CFK2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.15□□□□□ -1.11
Brf1Q8CFK2 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Brf1Q8CFK2 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.15□□□□□ -1.11
Brf1Q8CFK2 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
Brf1Q8CFK2 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brf1Q8CFK2 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms