Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43772-201ENSMUST00000202052 379 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm17834-201ENSMUST00000204322 891 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm9267-201ENSMUST00000222831 404 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Nup88Q8CEC0 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.98□□□□□ -1.13
Nup88Q8CEC0 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm22552-201ENSMUST00000157796 337 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm7289-201ENSMUST00000168993 734 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm7867-201ENSMUST00000189856 546 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm37620-201ENSMUST00000192910 501 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm4860-201ENSMUST00000200368 454 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm9357-201ENSMUST00000207138 805 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm2221-201ENSMUST00000209342 418 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm5528-201ENSMUST00000076314 480 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Nup88Q8CEC0 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Nup88Q8CEC0 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm12468-201ENSMUST00000116189 404 ntBASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.96□□□□□ -1.14
Nup88Q8CEC0 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms