Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm24173-201ENSMUST00000104130 128 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm22990-201ENSMUST00000175427 89 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm10136-201ENSMUST00000183196 435 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm28620-201ENSMUST00000190463 439 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm38068-201ENSMUST00000192546 540 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm9504-201ENSMUST00000196322 468 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm18838-201ENSMUST00000204855 886 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm9367-201ENSMUST00000205703 546 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm17997-201ENSMUST00000211801 840 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 AC130217.2-201ENSMUST00000224009 2990 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm24405-201ENSMUST00000083033 167 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 n-R5s217-201ENSMUST00000083341 116 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm6419-201ENSMUST00000097166 429 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 AC165080.3-201ENSMUST00000217162 3116 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm15616-201ENSMUST00000118662 375 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Mir6337-201ENSMUST00000184194 105 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm44265-201ENSMUST00000203631 465 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 AC122937.2-201ENSMUST00000228258 1051 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC8.09□□□□□ -1.11
Atg4aQ8C9S8 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms