Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim43aQ3TL54 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm26016-201ENSMUST00000104403 129 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm8916-201ENSMUST00000119732 949 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm14212-201ENSMUST00000122023 826 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm25717-201ENSMUST00000158631 353 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm6489-201ENSMUST00000178167 696 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm23139-201ENSMUST00000179454 132 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Mir8120-201ENSMUST00000185035 139 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm46311-201ENSMUST00000217971 203 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim43aQ3TL54 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm15129-201ENSMUST00000119673 279 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm22311-201ENSMUST00000158006 110 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm29369-201ENSMUST00000190674 615 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm9419-201ENSMUST00000200672 567 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm5305-201ENSMUST00000204010 746 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm44147-201ENSMUST00000204658 94 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm17950-201ENSMUST00000214617 646 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim43aQ3TL54 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.12□□□□□ -1.27
Trim43aQ3TL54 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim43aQ3TL54 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.12□□□□□ -1.27
Trim43aQ3TL54 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim43aQ3TL54 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms